项目作者: BTalamantesBecerra
项目描述 :
omicR for R studio creates fasta files, downloads genomes from NCBI using the refseq number, creates databases to run BLAST+, runs BLAST+ and filters these results to obtain the best match per sequence. These scripts can be used to run BLAST alignment of short-read (DArTseq data) and long-read sequences (Illumina, PacBio… etc). You can use reference genomes from NCBI, or any other genetic sequence that you would like to use as reference.
高级语言: Python
项目地址: git://github.com/BTalamantesBecerra/omicR_for_RStudio.git